miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|77300451|gb|CJ460062.1|CJ460062 GGGGGATTCCTCGAGCACTGTTGGCCTACTGGCCTTCGGCGACCCGACGGCTAAACCCCGCGCCATCCCCGACTGCCTGA
ACCGCTCCAGGAGACGGAGCGCAAGGCCAGCTTACCCACAGACGACTCAGGCGGGAGACGAGCGGTGTCATGGCCGCCTA
CAGTGACGATGGCGCAGCTTCAGCCCCCGCAGCTTCCGACGGTGGTGTCAGCAAAAGCACAACATCTGGGGAGGAGCTAG
TAGTCCGGGTTCCCGTAGTGGATGTGCAAAGCAACAACTTCAAAGAGATGTGGCCATCCCTCCTGCTAGCCATAAAGACA
GCTAATTTCGTGGCTGTGGACACGGAGCTGAGTGGGCTTGGGGACAGGAAGAGTTTGCTGAACCAGTGCATCGAGGAACG
TTACAAGGCTGTGTGTCATGCTGCCAGGACCCGTTCTATCCTCTCCCTGGGCCTCGCCTGCTTCAAGCGACAGCCAGACA
AGGGTGAACATTCCTATCTGGCTCAGGTGTTCAATCTCACTCTGCTGTGCATGGAGGAGTATGTCATAGAACCAAAGTCT
GTGCAGTTCCTGATACAGCATGGCTTCAACTTCAACCAGCAGTATGCCCAAGGCATCCCCTACCATAAGGGCAATGACAA
AGGTGATGAGAGCCAGAGCCAGTTAGTACGGACCCTATTCCTGGACCTATTCGAGCCCCCCGGCCCCTGTTGCTCACAAT
GGCCCTATAGACTTGGTGTTCCTATCCAAAACTTTTATGCACACCTTCCTTAGAAGTTGGGAACCTCG




Most similar to sp|Q96GM8|TOE1_HUMAN

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q96GM8|TOE1_HUMAN Target of EGR1 protein 1 OS=Homo sapiens
           GN=TOE1 PE=1 SV=1
          Length = 510

 Score =  313 bits (801), Expect = 1e-84
 Identities = 163/194 (84%), Positives = 164/194 (84%), Gaps = 1/194 (0%)
 Frame = +3

Query: 207 VSKSTTSGEELXXXXXXXXXQSNNFKEMWPSLLLAIKTANFVAVDTELSGLGDRKSLLNQ 386
           VSKSTTSGEEL         QSNNFKEMWPSLLLAIKTANFVAVDTELSGLGDRKSLLNQ
Sbjct: 20  VSKSTTSGEELVVQVPVVDVQSNNFKEMWPSLLLAIKTANFVAVDTELSGLGDRKSLLNQ 79

Query: 387 CIEERYKAVCHAARTRSILSLGLACFKRQPDKGEHSYLAQVFNLTLLCMEEYVIEPKSVQ 566
           CIEERYKAVCHAARTRSILSLGLACFKRQPDKGEHSYLAQVFNLTLLCMEEYVIEPKSVQ
Sbjct: 80  CIEERYKAVCHAARTRSILSLGLACFKRQPDKGEHSYLAQVFNLTLLCMEEYVIEPKSVQ 139

Query: 567 FLIQHGFNFNQQYAQGIPYHKGNDKGDESQSQLVRTLFLDLFEPPGP-CCSQWPYRLGVP 743
           FLIQHGFNFNQQYAQGIPYHKGNDKGDESQSQ VRTLFL+L     P         L   
Sbjct: 140 FLIQHGFNFNQQYAQGIPYHKGNDKGDESQSQSVRTLFLELIRARRPLVLHNGLIDLVFL 199

Query: 744 IQNFYAHLP*KLGT 785
            QNFYAHLP  LGT
Sbjct: 200 YQNFYAHLPESLGT 213